As the crisp air of fall rolls in, there’s nothing quite like the scent of warm spices wafting through your kitchen. Today, I’m sharing a recipe for Pumpkin Cream Cheese Muffins that will have you reaching for seconds—or even thirds. These muffins are incredibly easy to make, perfect for a swift morning breakfast or a delightful afternoon treat. With a luscious cream cheese filling that adds a creamy surprise to each fluffy bite, they’ll quickly become a staple in your home. Plus, the crunchy cinnamon sugar topping brings just the right amount of sweetness and warmth, making them irresistible. Are you ready to elevate your autumn baking game? Let’s dive into this delicious autumn-inspired recipe together!

Why Are These Muffins So Irresistible?
Moisture is key, thanks to the pumpkin purée that keeps each muffin tender and fluffy. Creamy filling elevates them from ordinary to extraordinary, delivering a delightful surprise with every bite. Quick and easy to whip up, making them perfect for busy mornings or last-minute guests. Versatile options let you swap ingredients, like adding chocolate chips for an extra treat or using Greek yogurt for a healthier twist. Ideal for breakfast, brunch, or a cozy afternoon snack, these muffins will quickly become a cherished recipe, just like my Pumpkin Cheesecake Muffins or Pumpkin Cupcakes with Maple Cream Cheese Frosting.
Pumpkin Cream Cheese Muffin Ingredients
For the Muffins
- All-purpose flour – Provides structure and stability to the muffins; you can substitute whole wheat flour for a healthier option.
- Dark brown sugar – Adds depth of flavor and moisture; light brown sugar can be used as a substitute.
- Baking powder & baking soda – Leavening agents that help the muffins rise; ensure they are fresh for the best results.
- Salt – Enhances sweetness and balances flavors; a pinch is essential.
- Pumpkin spice – Infuses warm flavors associated with fall; can be homemade by mixing cinnamon, nutmeg, ginger, cloves, and allspice.
- Canned pumpkin purée – Provides moisture and pumpkin flavor; fresh pumpkin may be used if processed correctly.
- Oil – Contributes moisture and a tender crumb; vegetable oil or melted coconut oil can work well.
- Egg – Binds the ingredients together; a flax egg can substitute for a vegan option.
- Vanilla extract – Adds depth and a pleasant aroma.
For the Cream Cheese Filling
- Cream cheese – The star ingredient for the filling, offering a rich and creamy texture; full-fat is recommended for the best taste.
- Granulated sugar (for filling & topping) – Sweetens both the filling and the topping; you can reduce the quantity for less sweetness.
- Cinnamon – Enhances the topping flavor; any ground cinnamon will work perfectly.
This delightful combination of ingredients creates the perfect Pumpkin Cream Cheese Muffins that are not only simple to prepare but also incredibly satisfying! Enjoy the cozy flavors of fall with each delicious bite.
Step‑by‑Step Instructions for Pumpkin Cream Cheese Muffins
Step 1: Prep Dry Ingredients
In a large mixing bowl, whisk together 2 cups of all-purpose flour, 1 cup of dark brown sugar, 2 teaspoons of baking powder, 1 teaspoon of baking soda, 1/2 teaspoon of salt, and 1 tablespoon of pumpkin spice. This combination forms the dry base for your Pumpkin Cream Cheese Muffins, providing a warm, aromatic flavor. Set this aside while you prepare the wet ingredients, allowing those cozy scents to fill the air.
Step 2: Prep Wet Ingredients
In a separate bowl, combine 1 cup of canned pumpkin purée, 1/2 cup of vegetable oil, 1 large egg, and 1 teaspoon of vanilla extract. Whisk the mixture until it’s smooth and well blended, ensuring the wet ingredients are thoroughly integrated. This step is crucial for achieving a moist batter and rich flavor in your Pumpkin Cream Cheese Muffins, creating that perfect creamy interior.
Step 3: Combine Mixtures
Gently fold the wet mixture into the dry ingredients using a rubber spatula. Mix until just combined, being careful not to overwork the batter; a few lumps are perfectly fine. Cover the bowl with a clean kitchen towel, allowing the batter to rest for 1 hour. This resting time enhances the muffin’s texture and flavor, making every muffin exceptionally delectable.
Step 4: Preheat Oven
While the batter is resting, preheat your oven to 425°F (220°C). Prepare a muffin pan by lining it with six paper liners. The high starting temperature will help your Pumpkin Cream Cheese Muffins rise beautifully, creating that perfect dome shape we all love. The anticipation of warm muffins baking adds to the cozy atmosphere in your kitchen.
Step 5: Make Cream Cheese Filling
In a small mixing bowl, blend 8 ounces of softened cream cheese, 1/4 cup of granulated sugar, and 1/2 teaspoon of vanilla extract until smooth and creamy. Transfer this mixture to a piping bag or a zip-top bag with a corner snipped. This delightful cream cheese filling will complement the pumpkin muffins perfectly, providing a rich and luscious core to each bite.
Step 6: Fill Muffins
Once the batter has rested, divide it evenly among six muffin liners, filling each about halfway. Next, pipe the cream cheese filling into the center of each muffin, ensuring each is filled generously. Top with more muffin batter to cover the cream cheese, then sprinkle a mixture of 2 tablespoons of cinnamon and 2 tablespoons of granulated sugar over the tops for that crunchy finish.
Step 7: Bake
Place the muffin pan in the preheated oven and bake at 425°F for 7 minutes. After that, reduce the oven temperature to 350°F (175°C) and continue baking for an additional 10-12 minutes. You’ll know the muffins are ready when they’re golden brown and a toothpick inserted into the center comes out clean, filling your kitchen with a mouthwatering aroma.
Step 8: Cool and Serve
Once baked, remove the Pumpkin Cream Cheese Muffins from the oven and let them cool in the pan for about 5 minutes. Carefully transfer them to a wire rack to cool completely. These muffins are best enjoyed warm, allowing the soft, creamy filling to shine, making them a perfect treat for breakfast or an afternoon snack.

Expert Tips for Pumpkin Cream Cheese Muffins
-
Perfectly Fresh: Always check your baking powder and baking soda for freshness. Stale leavening agents can cause muffins to rise poorly.
-
Room Temperature Ingredients: Ensure your pumpkin purée and cream cheese are at room temperature before mixing. This helps them incorporate smoothly into the batter.
-
Avoid Over-Mixing: Gently fold the ingredients until just combined to maintain a tender texture in your Pumpkin Cream Cheese Muffins. Over-mixing can lead to tough muffins.
-
Chill Cream Cheese Filling: For cleaner filling, chill the cream cheese mixture before piping. It’ll be firmer and easier to handle, ensuring a lovely center.
-
Monitor Baking Closely: Keep an eye on your muffins as they bake. Ovens may vary, and too long in the heat can dry them out.
-
Flavor Boosts: Feel free to experiment with add-ins like chopped nuts or chocolate chips for extra flavor and a delightful crunch in your Pumpkin Cream Cheese Muffins.
Pumpkin Cream Cheese Muffins Variations
Feel free to put your own spin on these delightful Pumpkin Cream Cheese Muffins and make them truly yours!
-
Whole Wheat: Swap half of the all-purpose flour for whole wheat for added nutrition. This gives your muffins a nuttier flavor and a wholesome texture.
-
Nutty Twist: Add in 1/2 cup of chopped walnuts or pecans for a satisfying crunch. The nuts will complement the creamy filling beautifully, enhancing the overall muffin experience.
-
Chocolate Chip Delight: Stir in 1/2 cup of chocolate chips for an indulgent treat. The melty chocolate paired with creamy pumpkin is a winning combination.
-
Dairy-Free: Replace the cream cheese with a dairy-free alternative, like almond cream cheese. This makes the muffins suitable for those with lactose intolerance while still keeping them delicious.
-
Yogurt Swap: Use Greek yogurt instead of oil for a low-fat version while keeping them moist. This twist not only reduces calories but also adds a tangy note that’s delightful.
-
Spicy Kick: Add a pinch of cayenne pepper to the batter for a surprisingly pleasant heat. This spicy touch pairs well with the sweet pumpkin and cream cheese flavors.
-
Apple Cinnamon Bliss: Incorporate 1 cup of diced apples for a cozy autumn flavor. The added moisture will perfectly complement the muffin’s texture, creating delightful bursts of fruitiness.
-
Sugar Reduction: Cut down on the granulated sugar by 1/4 cup for a less sweet option. This is perfect if you’re aiming for a healthier treat, and the pumpkin flavor will still shine through.
For more seasonal inspiration, you might also like to try my Pumpkin Cupcakes with Maple Cream Cheese Frosting or enjoy some delicious Pumpkin Oatmeal Cream Pies for a comforting fall dessert!
What to Serve with Pumpkin Cream Cheese Muffins
As the tantalizing aroma of freshly baked muffins fills your kitchen, you may wonder what delightful accompaniments might elevate your experience even further.
- Creamy Coffee: Start your morning with a silky cup of coffee that pairs beautifully with the spices in the muffins. This classic combination warms the soul.
- Maple Syrup Drizzle: A light drizzle of pure maple syrup adds a sweet touch, enhancing the fall flavors of pumpkin and spice, making each bite even more decadent.
- Fresh Fruit Salad: Light and refreshing, a colorful fruit salad can balance the rich creaminess of the muffins, adding a bright contrast to the meal.
- Cinnamon-Spiced Tea: A warm cup of cinnamon tea creates a comforting vibe and perfectly complements the cinnamon sugar topping on the muffins.
- Yogurt Parfait: Layer some creamy yogurt with granola and seasonal fruits. The tartness of the yogurt perfectly offsets the sweetness of the muffins for a wholesome breakfast.
- Chai Latte: The aromatic spices of a chai latte blend seamlessly with pumpkin flavors, turning your muffin experience into a cozy, indulgent treat.
- Nutty Granola: Serve these muffins alongside a bowl of nutty granola. The crunch offers a delightful texture contrast to the fluffiness of the muffins.
- Pumpkin Spice Latte: Embrace the season with a classic pumpkin spice latte for an overarching theme of comforting fall flavors in your meal.
- Herbal Infusion: Gently flavored herbal teas, such as chamomile or peppermint, provide a calming backdrop, enhancing the relaxation of your cozy breakfast or snack.
How to Store and Freeze Pumpkin Cream Cheese Muffins
Room Temperature: Store muffins in an airtight container at room temperature for up to 2 days to maintain freshness and a soft texture.
Fridge: If you want to keep them longer, place the muffins in the fridge for up to 5 days, ensuring they are covered to prevent drying out.
Freezer: For long-term storage, freeze Pumpkin Cream Cheese Muffins for up to 3 months. Wrap each muffin tightly in plastic wrap and place them in a freezer-safe bag.
Reheating: To enjoy muffins after freezing, thaw them overnight in the refrigerator, then warm in the microwave for 15-20 seconds. This restores their delightful softness!
Make Ahead Options
These Pumpkin Cream Cheese Muffins are perfect for meal prep enthusiasts! You can prepare the muffin batter up to 24 hours in advance, just refrigerate it in an airtight container to maintain freshness. The cream cheese filling can also be made ahead and stored separately in the fridge for up to 3 days. When you’re ready to bake, simply spoon the chilled batter into the muffin liners, pipe in the filling, and top them with the cinnamon sugar mix before popping them into the oven. This way, you’ll have delicious muffins ready with minimal effort, making busy mornings that much sweeter!

Pumpkin Cream Cheese Muffins Recipe FAQs
What kind of pumpkin puree is best for this recipe?
Absolutely! For the best flavor and moisture, I recommend using canned pumpkin puree, as it’s consistently rich and smooth. However, if you prefer fresh pumpkin, make sure to roast and puree it, removing all the water to achieve a similar texture.
How should I store leftover Pumpkin Cream Cheese Muffins?
You can store your muffins in an airtight container at room temperature for up to 2 days. If you’d like to keep them for longer, they can go in the fridge for up to 5 days. Just make sure to cover them to prevent them from drying out—no one wants a sad muffin!
Can I freeze the muffins, and if so, how?
Very! To freeze your Pumpkin Cream Cheese Muffins, wrap each muffin tightly in plastic wrap and place them in a freezer-safe bag. They will last for up to 3 months. When you’re ready to enjoy, simply thaw overnight in the refrigerator, then warm them in the microwave for 15-20 seconds to regain their delightful softness.
What if my muffins come out dense instead of fluffy?
If your muffins turn out dense, it may be due to overmixing the batter. When combining wet and dry ingredients, mix gently until just combined—it’s okay if there are a few lumps! Also, ensure your leavening agents (baking powder and baking soda) are fresh, as expired agents won’t give your muffins the lift they need.
Are there any dietary considerations for these muffins?
Absolutely! If you’re avoiding gluten, you can substitute the all-purpose flour with a gluten-free blend. For dairy-free options, consider using vegan cream cheese and a flax egg in place of the regular egg. As with any recipe, always double-check ingredient labels to ensure they meet your specific dietary needs.
How can I enhance the flavor of my Pumpkin Cream Cheese Muffins?
To infuse even more flavor into your muffins, try adding chopped nuts like walnuts or pecans for a delightful crunch. You could also mix in chocolate chips or even a sprinkle of nutmeg along with your pumpkin spice for a richer autumnal taste. Adjusting spices and add-ins is a fun way to make the recipe your own!

Decadent Pumpkin Cream Cheese Muffins for Cozy Mornings
Ingredients
Equipment
Method
- Prep Dry Ingredients: In a large mixing bowl, whisk together the flour, dark brown sugar, baking powder, baking soda, salt, and pumpkin spice.
- Prep Wet Ingredients: In a separate bowl, combine the canned pumpkin purée, vegetable oil, egg, and vanilla extract. Whisk until smooth.
- Combine Mixtures: Gently fold the wet mixture into the dry ingredients and let the batter rest for one hour covered with a kitchen towel.
- Preheat Oven: Preheat your oven to 425°F and line a muffin pan with paper liners.
- Make Cream Cheese Filling: Blend cream cheese, granulated sugar, and vanilla extract until smooth. Transfer to a piping bag.
- Fill Muffins: Divide the batter among the muffin liners. Pipe the cream cheese filling into each muffin and top with more muffin batter. Sprinkle sugar and cinnamon mixture on top.
- Bake: Bake at 425°F for 7 minutes, then reduce temperature to 350°F and bake for an additional 10-12 minutes until golden brown.
- Cool and Serve: Let the muffins cool for 5 minutes in the pan before transferring them to a wire rack.

Leave a Reply